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Ridge, New York, United States
Onsite
Brookhaven National Laboratory’s National Synchrotron Light Source II (NSLS-II) seeks a Postdoctoral Research Associate for AI-driven Structure Analysis for Biological Discoveries for an on-site position in the Biological, Environmental and Planetary Science Division.
Advance the frontiers of structural biology by developing AI-driven methods for interpreting complex crystallographic data. This role will enable new discoveries in protein function, ligand binding, and dynamics through scalable computational analysis.
The ideal candidate would have a background and an interest in Computational Biology, Artificial Intelligence and Machine Learning.
Join a team of scientists at the leading macromolecular crystallography beamlines and at the computing center and contribute to science projects at the interface between AI method development and large-scale research facilities.
Essential Duties and Responsibilities
Develop workflows to improve models and maps to optimize likelihood for ligand placement
Develop AI/ML methods for automated interpretation of crystallography data for optimal ligand placement.
Build and curate training datasets linking electron density maps and structural models.
Design and evaluate AI models for 3D structural data.
Develop workflows for time-resolved crystallography data processing.
Integrate molecular dynamics with AI/ML methods.
Benchmark protein foundation model performance and integrate them with experimental analysis pipelines.
Work collaboratively with domain scientists, beamline scientists, and computational scientists.
Document methods and results.
Required Knowledge, Skills, and Abilities
Ph.D. in computer science, computational biology, physics, or related field.
Expertise in machine learning or AI.
Experience with molecular dynamics simulations and computational workflows.
Ability to work in teams.
Demonstrated track record of publications in the field.
Preferred Knowledge, Skills, and Abilities
Experience with structural biology, 3D ML and biology specific AI models.
Experience with HPC and surrogate modeling.
Familiarity with workflow orchestration tools.
Additional Information:
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About Us
Brookhaven National Laboratory (www.bnl.gov) delivers discovery science and transformative technology to power and secure the nation’s future. Brookhaven Lab is a multidisciplinary laboratory with seven Nobel Prize-winning discoveries, 37 R&D 100 Awards, and more than 70 years of pioneering research. The Lab is primarily supported by the U.S. Department of Energy’s (DOE) Office of Science. Brookhaven Science Associates (BSA) operates and manages the Laboratory for DOE. BSA is a partnership between Battelle and The Research Foundation for the State University of New York on behalf of Stony Brook University. BSA salutes our veterans and active military members with careers that leverage the skills and unique experience they gained while serving our country, learn more at BNL | Opportunities for Veterans at Brookhaven National Laboratory.
Equal Opportunity/Affirmative Action Employer
Guided by our core values of integrity, responsibility, innovation, respect, and teamwork, Brookhaven Science Associates is an Equal Employment Opportunity Employer-Vets/Disabled. We are committed to fostering a respectful and collaborative environment that fuels scientific discovery. We consider all qualified applicants without regard to any characteristic protected by law. All qualified individuals are encouraged to apply. We ensure that individuals with disabilities are provided reasonable accommodation to participate in the job application or interview process, to perform essential job functions, and to receive other benefits and privileges of employment. Please contact us to request accommodation. *VEVRAA Federal Contractor
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